The linked sequence file lists up to 10 UShER tips matching the most-common form. Phylogeny panels not drawn (skip_phylo_pages = TRUE in _targets.R).

PY.1 + N417T + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + Y453F — 3 substitutions · 0.0444% of sequences

form: PY.1 + M153I_RF.5 + N417T + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + Y453F + K478T_{-A, RW.1.1, RF} + K679R_{BA.3.2.1, BA.3.2.2, RF}

Matching sequence names (newest 10)

PY.1 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + K481R — 2 substitutions · 0.133% of sequences

form: PY.1 + M153I_RF.5 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + K478T_{-A, RW.1.1, RF} + K481R + K679R_{BA.3.2.1, BA.3.2.2, RF} + A706S

Matching sequence names (newest 10)

PY.1 + T346K + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} — 2 substitutions · 0.0888% of sequences

form: PY.1 + T346K + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + K679R_{BA.3.2.1, BA.3.2.2, RF}

Matching sequence names (newest 10)

PY.1 + N417T + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} — 2 substitutions · 0.0888% of sequences

form: PY.1 + W64R + M153I_RF.5 + N417T + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + K478T_{-A, RW.1.1, RF} + K679R_{BA.3.2.1, BA.3.2.2, RF}

Matching sequence names (newest 10)

PY.1 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + K478I_NB.1.8.1 — 2 substitutions · 0.0888% of sequences

form: PY.1 + N22T_-A + M153I_RF.5 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + K478I_NB.1.8.1 + K679R_{BA.3.2.1, BA.3.2.2, RF}

Matching sequence names (newest 10)

PY.1 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + T500A — 2 substitutions · 0.0888% of sequences

form: PY.1 + M153I_RF.5 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + K478T_{-A, RW.1.1, RF} + T500A + K679R_{BA.3.2.1, BA.3.2.2, RF}

Matching sequence names (newest 10)

PY.1 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + R444S — 2 substitutions · 0.0444% of sequences

form: PY.1 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + R444S + K679R_{BA.3.2.1, BA.3.2.2, RF}

Matching sequence names (newest 10)

PY.1 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + K478Q — 2 substitutions · 0.0444% of sequences

form: PY.1 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + K478Q + N658T + K679R_{BA.3.2.1, BA.3.2.2, RF}

Matching sequence names (newest 10)

PY.1 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + K484R — 2 substitutions · 0.0444% of sequences

form: PY.1 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + K484R + K679R_{BA.3.2.1, BA.3.2.2, RF} + D1184N

Matching sequence names (newest 10)

PY.1 + N487D_XFG + Q493E_{KP.3, LP.8, NB.1.8.1, XFG} — 2 substitutions · 0.0444% of sequences

form: PY.1 + P445R_{LP.8, XFG} + N487D_XFG + Q493E_{KP.3, LP.8, NB.1.8.1, XFG} + T572I_XFG

Matching sequence names (newest 10)

PY.1 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} — 1 substitutions · 61.6% of sequences

form: PY.1 + A435S_{BA.3.2.1, BA.3.2.2, NB.1.8.1, RW.1.1, RF} + K679R_{BA.3.2.1, BA.3.2.2, RF}

Matching sequence names (newest 10)

PY.1 + W452R_{B.1.617.2, BA.5} — 1 substitutions · 0.178% of sequences

form: PY.1 + W452R_{B.1.617.2, BA.5}

Matching sequence names (newest 10)

PY.1 + W436S — 1 substitutions · 0.0888% of sequences

form: PY.1 + M153I_RF.5 + W436S + K478T_{-A, RW.1.1, RF} + K679R_{BA.3.2.1, BA.3.2.2, RF}

Matching sequence names (newest 10)

PY.1 + H339R — 1 substitutions · 0.0444% of sequences

form: PY.1 + H339R

Matching sequence names (newest 10)

PY.1 + P445L — 1 substitutions · 0.0444% of sequences

form: PY.1 + R444K_{-A, XFJ} + P445L + N477S_-A

Matching sequence names (newest 10)

PY.1 + Q474K — 1 substitutions · 0.0444% of sequences

form: PY.1 + Q474K

Matching sequence names (newest 10)

PY.1 + P486L — 1 substitutions · 0.0444% of sequences

form: PY.1 + M153I_RF.5 + P486L

Matching sequence names (newest 10)

PY.1 + P486S_XBB — 1 substitutions · 0.0444% of sequences

form: PY.1 + K478T_{-A, RW.1.1, RF} + P486S_XBB

Matching sequence names (newest 10)

PY.1 + S494P — 1 substitutions · 0.0444% of sequences

form: PY.1 + S494P

Matching sequence names (newest 10)