Each row is one combination of substitutions in an "interesting substitution group" seen in a natural sequence.
Members: 335F, 337R, 339L, 339R, 340Q, 346I, 440R. Root-only baseline: 662 sequences (100.00%).
Trees & matching sequences for this group →
| combination | n subs | seqs | freq | top pango (combination) | most common form | n form | top pango (most common form) | most common form (vs closest pango) |
|---|
Members: 335F, 337R, 339L, 339R, 340Q, 345S, 346I, 346K, 440R, 444T, 445L, 446N. Root-only baseline: 662 sequences (100.00%).
Trees & matching sequences for this group →
| combination | n subs | seqs | freq | top pango (combination) | most common form | n form | top pango (most common form) | most common form (vs closest pango) |
|---|
Members: 335F, 335S, 339L, 339R, 371Y, 377Y, 462Q, 462T, 487D, 493E, 516Q. Root-only baseline: 662 sequences (100.00%).
Trees & matching sequences for this group →
| combination | n subs | seqs | freq | top pango (combination) | most common form | n form | top pango (most common form) | most common form (vs closest pango) |
|---|
Members: 333K, 334T, 335F, 335S, 337R, 339L, 339R, 340Q, 345S, 346A, 346I, 346K, 346S, 356N, 369F, 370T, 371Y, 372P, 376S, 377Y, 384T, 385I, 385P, 406Q, 408G, 417T, 429Y, 430I, 430P, 434L, 436S, 439K, 440R, 441H, 444S, 444T, 445L, 446N, 452R, 452S, 453F, 456V, 462Q, 462T, 468L, 473F, 474K, 478I, 481E, 481R, 481T, 482R, 482S, 484R, 485A, 486L, 486S, 487D, 487T, 490Y, 493E, 494P, 499H, 499T, 500A, 500N, 503I, 516Q, 518I. Root-only baseline: 652 sequences (98.49%).
Trees & matching sequences for this group →
| combination | n subs | seqs | freq | top pango (combination) | most common form | n form | top pango (most common form) | most common form (vs closest pango) |
|---|---|---|---|---|---|---|---|---|
| RF + N417T + Y453F | 2 | 1 | 0.151% | RF.5.3 (1) | RF + M153IRF.5 + N417T + Y453F | 1 | RF.5.3 (1) | RF.5 + N417T + Y453F |
| RF + N417T | 1 | 2 | 0.302% | RF.5.3 (2) | RF + W64R + M153IRF.5 + N417T | 2 | RF.5.3 (2) | RF.5 + W64R + N417T |
| RF + W436S | 1 | 2 | 0.302% | RF.5 (2) | RF + M153IRF.5 + S435A-A + W436S | 2 | RF.5 (2) | RF.5 + S435A-A + W436S |
| RF + T478INB.1.8.1 | 1 | 2 | 0.302% | PY.1.1.1 (2) | RF + N22T-A + M153IRF.5 + T478INB.1.8.1 | 2 | PY.1.1.1 (2) | RF.5 + N22T-A + T478INB.1.8.1 |
| RF + T500A | 1 | 2 | 0.302% | RF.5.1 (2) | RF + M153IRF.5 + T500A | 2 | RF.5.1 (2) | RF.5 + T500A |
| RF + K481R | 1 | 1 | 0.151% | RF.5.1 (1) | RF + M153IRF.5 + K481R + A706S | 1 | RF.5.1 (1) | RF.5 + K481R + A706S |
Members: 335F, 339L, 339R, 340Q, 345S, 346K, 356N, 417T, 430P, 440R, 444T, 462Q, 473F, 478I, 481R, 482R, 482S, 484R, 487D, 487T, 493E, 500A. Root-only baseline: 654 sequences (98.79%).
Trees & matching sequences for this group →
| combination | n subs | seqs | freq | top pango (combination) | most common form | n form | top pango (most common form) | most common form (vs closest pango) |
|---|---|---|---|---|---|---|---|---|
| RF + N417T | 1 | 3 | 0.453% | RF.5.3 (3) | RF + W64R + M153IRF.5 + N417T | 2 | RF.5.3 (2) | RF.5 + W64R + N417T |
| RF + T478INB.1.8.1 | 1 | 2 | 0.302% | PY.1.1.1 (2) | RF + N22T-A + M153IRF.5 + T478INB.1.8.1 | 2 | PY.1.1.1 (2) | RF.5 + N22T-A + T478INB.1.8.1 |
| RF + T500A | 1 | 2 | 0.302% | RF.5.1 (2) | RF + M153IRF.5 + T500A | 2 | RF.5.1 (2) | RF.5 + T500A |
| RF + K481R | 1 | 1 | 0.151% | RF.5.1 (1) | RF + M153IRF.5 + K481R + A706S | 1 | RF.5.1 (1) | RF.5 + K481R + A706S |
Members: 406Q, 408G, 417T, 436S, 439K, 440R, 441H, 444S, 444T, 445L, 446N, 452R, 452S, 453F, 456V, 473F, 474K, 478I, 481E, 481R, 481T, 482R, 482S, 484R, 485A, 486L, 486S, 487D, 487T, 490Y, 493E, 494P, 499H, 499T, 500A, 500N, 503I, 508H, 508F. Root-only baseline: 652 sequences (98.49%).
Trees & matching sequences for this group →
| combination | n subs | seqs | freq | top pango (combination) | most common form | n form | top pango (most common form) | most common form (vs closest pango) |
|---|---|---|---|---|---|---|---|---|
| RF + N417T + Y453F | 2 | 1 | 0.151% | RF.5.3 (1) | RF + M153IRF.5 + N417T + Y453F | 1 | RF.5.3 (1) | RF.5 + N417T + Y453F |
| RF + N417T | 1 | 2 | 0.302% | RF.5.3 (2) | RF + W64R + M153IRF.5 + N417T | 2 | RF.5.3 (2) | RF.5 + W64R + N417T |
| RF + W436S | 1 | 2 | 0.302% | RF.5 (2) | RF + M153IRF.5 + S435A-A + W436S | 2 | RF.5 (2) | RF.5 + S435A-A + W436S |
| RF + T478INB.1.8.1 | 1 | 2 | 0.302% | PY.1.1.1 (2) | RF + N22T-A + M153IRF.5 + T478INB.1.8.1 | 2 | PY.1.1.1 (2) | RF.5 + N22T-A + T478INB.1.8.1 |
| RF + T500A | 1 | 2 | 0.302% | RF.5.1 (2) | RF + M153IRF.5 + T500A | 2 | RF.5.1 (2) | RF.5 + T500A |
| RF + K481R | 1 | 1 | 0.151% | RF.5.1 (1) | RF + M153IRF.5 + K481R + A706S | 1 | RF.5.1 (1) | RF.5 + K481R + A706S |